Tool name | Amadeus |
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URL | http://acgt.cs.tau.ac.il/amadeus/ |
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Important features | This tool predicts transcription factor binding sites and microRNA motif regions. |
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Citations | Linhart C, Halperin Y, Shamir R. Transcription factor and microRNA motif discovery: the Amadeus platform and a compendium of metazoan target sets. Genome Res. 2008 Jul;18(7):1180-9. Epub 2008 Apr 14. PubMed PMID: 18411406; PubMed
Central PMCID: PMC2493407. |
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Year of publication | 2008 |
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Rank by usage frequency | 100 |
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Comments | Downloadable along with motif file, and it can be downloaded from the given link for prediction of the known motif. |
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Function | Motif detection by pattern/matrix input (KNOWN), Motif detection by Background file (KNOWN), Motif detection by promoter/TSS mode (KNOWN) |
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Category | Downloadable |
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Platform | Windows /Linux |
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